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Claidex MCP

com.claidex/failure-intelligence
Gesundheitswesen Wissenschaft & Engineering Suche & Recherche Öffentlich und erreichbar MCP 2026-07-28

Was dieses MCP kann

Searches biomedical claims, clinical trials, drug databases, adverse-event data, literature, preprints, and failure-risk analyses.

Funktionen

Tools

24 Tools
claidex_capabilities
Claidex MCP Capabilities
Return the Claidex MCP feature map, configured storage/model providers, safety controls, resources, prompts, and tool counts.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'properties': {}, 'additionalProperties': False}
claidex_claim_risk_matrix
Claidex Claim Risk Matrix
Search claims and summarize MRS bands, trial phases, failure archetypes, and high-risk programs for rapid diligence.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'limit'], 'properties': {'limit': {'type': 'integer', 'default': 10, 'maximum': 20, 'minimum': 1}, 'query': {'type': 'string', 'minLength': 1, 'description': 'Drug, target, disease, sponsor, or failure archetype.'}}, 'additionalProperties': False}
claidex_health_snapshot
Claidex Health Snapshot
Return Sentinel metrics, coverage, graph counts, recent automation runs, MRS bands, and preprint-watch summaries.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'properties': {}, 'additionalProperties': False}
claidex_research_prompt
Claidex Research Prompt
Compose a rigorous, reusable investigation prompt that tells an MCP client which Claidex tools and resources to use.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['objective', 'risk_tolerance'], 'properties': {'disease': {'type': 'string', 'description': 'Optional disease area.'}, 'objective': {'type': 'string', 'minLength': 1, 'description': 'The investigation objective to turn into a reusable MCP prompt.'}, 'target_gene': {'type': 'string', 'description': 'Optional HGNC target symbol.'}, 'risk_tolerance': {'enum': ['low', 'medium', 'high'], 'type': 'string', 'default': 'medium'}}, 'additionalProperties': False}
claidex_tool_catalog
Claidex Tool Catalog
Return the complete MCP tool catalog, optionally including full input schemas and filtering native versus agent-backed tools.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['include_schemas', 'source'], 'properties': {'source': {'enum': ['all', 'claidex-agent', 'mcp-native'], 'type': 'string', 'default': 'all'}, 'include_schemas': {'type': 'boolean', 'default': False, 'description': 'Include full JSON Schemas in the catalog.'}}, 'additionalProperties': False}
consult_specialist_model
Consult Specialist Model
Ask a specialist Gateway model for code, database/tool-calling, statistics, literature, preprint, or mechanistic synthesis support. Use for hard subproblems, second opinions, code generation/review, or complex synthesis.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['task_type', 'prompt'], 'properties': {'prompt': {'type': 'string', 'maxLength': 6000, 'minLength': 1, 'description': 'Focused task for the specialist model.'}, 'context': {'type': 'string', 'maxLength': 10000, 'description': 'Relevant context, snippets, or data. Do not include secrets.'}, 'task_type': {'enum': ['code', 'database', 'reasoning', 'statistics', 'research', 'literature', 'synthesis', 'preprint', 'general'], 'type': 'string', 'description': 'Specialist routing target.'}}, 'additionalProperties': False}
fetch
Fetch Claidex Result
Fetch a specific result returned by search. This compatibility tool supports OpenAI and ChatGPT remote MCP retrieval flows.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['id'], 'properties': {'id': {'type': 'string', 'minLength': 1, 'description': 'Result id returned by the search tool.'}}, 'additionalProperties': False}
fetch_research_url
Fetch Research Url
Fetch a public HTTPS research URL, JSON API response, package metadata endpoint, documentation page, or dataset preview. Blocks private/internal hosts and truncates large responses.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['url', 'max_chars'], 'properties': {'url': {'type': 'string', 'format': 'uri', 'description': 'Public HTTPS URL to fetch.'}, 'max_chars': {'type': 'number', 'default': 8000, 'maximum': 20000, 'minimum': 500}}, 'additionalProperties': False}
get_claim_content
Get Claim Content
Retrieve the complete text content of a specific Claidex Claim by its slug. Use this when you need to read the full post-mortem analysis, including hypothesis, failure mechanism, and prevention analysis.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['slug'], 'properties': {'slug': {'type': 'string', 'minLength': 1, 'description': 'The Claidex claim slug, e.g. exicorilant-mcrpc-gr-bypass-fourth-failure'}}, 'additionalProperties': False}
query_chembl
Query Chembl
Look up a drug or compound in ChEMBL. Returns mechanism of action, primary target, ChEMBL ID, max development phase, molecular type, and synonyms.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['drug_name'], 'properties': {'drug_name': {'type': 'string', 'minLength': 1, 'description': 'Drug or compound name'}}, 'additionalProperties': False}
query_clinicaltrials
Query Clinicaltrials
Search ClinicalTrials.gov for clinical trials. Can search by drug name, condition, target, or NCT ID. Returns trial status, phase, sponsor, primary endpoints, and why_stopped if terminated.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'status', 'phase', 'max_results'], 'properties': {'phase': {'enum': ['PHASE1', 'PHASE2', 'PHASE3', 'PHASE4', 'any'], 'type': 'string', 'default': 'any'}, 'query': {'type': 'string', 'minLength': 1, 'description': 'Search term: drug name, condition, NCT ID, or target'}, 'status': {'enum': ['RECRUITING', 'ACTIVE_NOT_RECRUITING', 'TERMINATED', 'WITHDRAWN', 'COMPLETED', 'any'], 'type': 'string', 'default': 'any'}, 'max_results': {'type': 'number', 'default': 5, 'maximum': 10, 'minimum': 1}}, 'additionalProperties': False}
query_failure_graph
Query Failure Graph
Query the Claidex failure graph for a specific gene target. Returns the Mechanism Risk Score (MRS), failure counts by phase and archetype, and all related claim slugs.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['target_gene'], 'properties': {'target_gene': {'type': 'string', 'minLength': 1, 'description': 'HGNC gene symbol, e.g. PIK3CA, KRAS, EGFR'}}, 'additionalProperties': False}
query_openfda
Query Openfda
Query the FDA FAERS database for adverse event signals for a drug. Returns top adverse event terms, serious case count, and death count.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['drug_name', 'max_results'], 'properties': {'drug_name': {'type': 'string', 'minLength': 1, 'description': 'Drug name as it appears in FAERS'}, 'max_results': {'type': 'number', 'default': 10, 'maximum': 20, 'minimum': 1}}, 'additionalProperties': False}
query_opentargets
Query Opentargets
Query Open Targets for target-disease association evidence. Returns genetic evidence score, clinical evidence, known drugs, tractability, and safety liabilities for a gene-disease pair.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['target_gene', 'disease_term'], 'properties': {'target_gene': {'type': 'string', 'minLength': 1, 'description': 'HGNC gene symbol'}, 'disease_term': {'type': 'string', 'minLength': 1, 'description': 'Disease name or EFO term'}}, 'additionalProperties': False}
query_package_registry
Query Package Registry
Look up package metadata from npm or PyPI before recommending code, analysis packages, API clients, or dataset tooling.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['ecosystem', 'package_name'], 'properties': {'ecosystem': {'enum': ['npm', 'pypi'], 'type': 'string', 'description': 'Package registry to query.'}, 'package_name': {'type': 'string', 'maxLength': 120, 'minLength': 1, 'description': 'Package name.'}}, 'additionalProperties': False}
rank_documents_by_embedding
Rank Documents By Embedding
Embed a query and candidate documents, then rank documents by cosine similarity. Use for semantic matching, retrieval checks, clustering triage, and lightweight RAG over user-provided passages.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'documents', 'top_k'], 'properties': {'query': {'type': 'string', 'maxLength': 4000, 'minLength': 1}, 'top_k': {'type': 'number', 'default': 10, 'maximum': 20, 'minimum': 1}, 'documents': {'type': 'array', 'items': {'type': 'string', 'maxLength': 8000, 'minLength': 1}, 'maxItems': 30, 'minItems': 1}}, 'additionalProperties': False}
rerank_documents
Rerank Documents
Rerank candidate documents/passages against a query using a dedicated reranking model. Use after retrieval/search when exact relevance ordering matters.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'documents', 'top_n'], 'properties': {'query': {'type': 'string', 'maxLength': 4000, 'minLength': 1}, 'top_n': {'type': 'number', 'default': 10, 'maximum': 20, 'minimum': 1}, 'documents': {'type': 'array', 'items': {'type': 'string', 'maxLength': 8000, 'minLength': 1}, 'maxItems': 50, 'minItems': 1}}, 'additionalProperties': False}
run_computation
Run Computation
Evaluate deterministic mathematical expressions with optional variables. Use for algebra, matrices, vectors, transformations, descriptive numerical checks, and reproducible calculations. Does not execute arbitrary JavaScript or install packages.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['expression', 'variables'], 'properties': {'variables': {'type': 'object', 'default': {}, 'description': 'Variables available to the expression. Values must be numbers, strings, vectors, or matrices.', 'propertyNames': {'type': 'string'}, 'additionalProperties': {'anyOf': [{'type': 'number'}, {'type': 'string'}, {'type': 'array', 'items': {'type': 'number'}}, {'type': 'array', 'items': {'type': 'array', 'items': {'type': 'number'}}}]}}, 'expression': {'type': 'string', 'maxLength': 4000, 'minLength': 1, 'description': 'MathJS expression, e.g. mean(values), std(values), multiply(A, b), inv(A).'}}, 'additionalProperties': False}
run_statistical_analysis
Run Statistical Analysis
Run a statistical analysis computation. Supports: Wilson confidence intervals, binomial proportions, phase transition success rates, power calculations, Bayesian posterior estimates, descriptive statistics, and two-proportion comparisons. Returns computed values, interpretation, and LaTeX formula.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['analysis_type', 'inputs'], 'properties': {'inputs': {'type': 'object', 'description': 'Named input parameters. wilson_ci: {successes, n, confidence}. phase_transition_rate: {phase, indication, n_succeeded, n_total}. power_calculation: {n, effect_size, alpha}. bayesian_posterior: {prior_success_rate, n_observed, n_success, prior_strength?}. descriptive_stats: {values: number[]}. failure_rate_comparison: {a_success, a_n, b_success, b_n}.', 'propertyNames': {'type': 'string'}, 'additionalProperties': {'anyOf': [{'type': 'number'}, {'type': 'string'}, {'type': 'array', 'items': {'type': 'number'}}]}}, 'context': {'type': 'string', 'description': 'Optional context about what this analysis is for'}, 'analysis_type': {'enum': ['wilson_ci', 'phase_transition_rate', 'power_calculation', 'bayesian_posterior', 'descriptive_stats', 'failure_rate_comparison'], 'type': 'string'}}, 'additionalProperties': False}
search
Search Claidex
Search Claidex failure claims and preprint flags. This compatibility tool returns citation-ready results for OpenAI and ChatGPT remote MCP flows.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'limit'], 'properties': {'limit': {'type': 'integer', 'default': 8, 'maximum': 10, 'minimum': 1}, 'query': {'type': 'string', 'minLength': 1, 'description': 'Biomedical failure intelligence query.'}}, 'additionalProperties': False}
search_claims
Search Claims
Search the Claidex failure database for post-mortems matching a drug name, gene target, disease, failure archetype, or sponsor. Returns matching claims with title, slug, drug, target, disease, phase, failure archetype, Open Targets score, and MRS score.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'category', 'failure_archetype', 'limit'], 'properties': {'limit': {'type': 'number', 'default': 10, 'maximum': 20, 'minimum': 1}, 'query': {'type': 'string', 'minLength': 1, 'description': 'Search term: drug name, gene symbol, disease, or failure archetype'}, 'category': {'enum': ['Oncology', 'Cardiology', 'Neurology', 'Immunology', 'Infectious Disease', 'Metabolic', 'Rare Disease', 'Other', 'any'], 'type': 'string', 'default': 'any'}, 'failure_archetype': {'enum': ['efficacy_failure', 'safety_signal', 'enrollment_collapse', 'sponsor_decision', 'strategic_reprioritization', 'translational_mismatch', 'biomarker_failure', 'any'], 'type': 'string', 'default': 'any'}}, 'additionalProperties': False}
search_preprint_flags
Search Preprint Flags
Search the Claidex Preprint Watch database for bioRxiv preprints flagged as contradicting the clinical failure record. Search by target gene, disease, or preprint title.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'severity'], 'properties': {'query': {'type': 'string', 'minLength': 1, 'description': 'Search term: gene symbol, disease, or preprint title fragment'}, 'severity': {'enum': ['STRONG', 'MODERATE', 'MILD', 'any'], 'type': 'string', 'default': 'any'}}, 'additionalProperties': False}
search_pubmed
Search Pubmed
Search PubMed for biomedical literature. Returns title, authors, journal, year, DOI, abstract, and PMID for each result.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'max_results'], 'properties': {'query': {'type': 'string', 'minLength': 1, 'description': 'PubMed search query'}, 'max_results': {'type': 'number', 'default': 5, 'maximum': 10, 'minimum': 1}}, 'additionalProperties': False}
web_search
Web Search
Search the web for recent news, investor commentary, analyst notes, press releases, and conference coverage about drugs, clinical trials, or biomedical mechanisms.
Eingabeschema 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'focus'], 'properties': {'focus': {'enum': ['news', 'academic', 'investor', 'any'], 'type': 'string', 'default': 'any'}, 'query': {'type': 'string', 'minLength': 1, 'description': 'Search query'}}, 'additionalProperties': False}
Verlauf

Letzte Tool-Änderungen

Hinzugefügt
web_search
25. September 2026 02:46
Hinzugefügt
search_pubmed
25. September 2026 02:46
Hinzugefügt
search_preprint_flags
25. September 2026 02:46
Hinzugefügt
search_claims
25. September 2026 02:46
Hinzugefügt
search
25. September 2026 02:46
Hinzugefügt
run_statistical_analysis
25. September 2026 02:46
Hinzugefügt
run_computation
25. September 2026 02:46
Hinzugefügt
rerank_documents
25. September 2026 02:46
Hinzugefügt
rank_documents_by_embedding
25. September 2026 02:46
Hinzugefügt
query_package_registry
25. September 2026 02:46
Hinzugefügt
query_opentargets
25. September 2026 02:46
Hinzugefügt
query_openfda
25. September 2026 02:46
Hinzugefügt
query_failure_graph
25. September 2026 02:46
Hinzugefügt
query_clinicaltrials
25. September 2026 02:46
Hinzugefügt
query_chembl
25. September 2026 02:46
Hinzugefügt
get_claim_content
25. September 2026 02:46
Hinzugefügt
fetch_research_url
25. September 2026 02:46
Hinzugefügt
fetch
25. September 2026 02:46
Hinzugefügt
consult_specialist_model
25. September 2026 02:46
Hinzugefügt
claidex_tool_catalog
25. September 2026 02:46
Hinzugefügt
claidex_research_prompt
25. September 2026 02:46
Hinzugefügt
claidex_health_snapshot
25. September 2026 02:46
Hinzugefügt
claidex_claim_risk_matrix
25. September 2026 02:46
Hinzugefügt
claidex_capabilities
25. September 2026 02:46
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