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Servidor MCP

Claidex MCP

com.claidex/failure-intelligence
Salud Ciencia e ingeniería Búsqueda e investigación Público y accesible MCP 2026-07-28

Qué hace este MCP

Searches biomedical claims, clinical trials, drug databases, adverse-event data, literature, preprints, and failure-risk analyses.

Capacidades

Herramientas

24 herramientas
claidex_capabilities
Claidex MCP Capabilities
Return the Claidex MCP feature map, configured storage/model providers, safety controls, resources, prompts, and tool counts.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'properties': {}, 'additionalProperties': False}
claidex_claim_risk_matrix
Claidex Claim Risk Matrix
Search claims and summarize MRS bands, trial phases, failure archetypes, and high-risk programs for rapid diligence.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'limit'], 'properties': {'limit': {'type': 'integer', 'default': 10, 'maximum': 20, 'minimum': 1}, 'query': {'type': 'string', 'minLength': 1, 'description': 'Drug, target, disease, sponsor, or failure archetype.'}}, 'additionalProperties': False}
claidex_health_snapshot
Claidex Health Snapshot
Return Sentinel metrics, coverage, graph counts, recent automation runs, MRS bands, and preprint-watch summaries.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'properties': {}, 'additionalProperties': False}
claidex_research_prompt
Claidex Research Prompt
Compose a rigorous, reusable investigation prompt that tells an MCP client which Claidex tools and resources to use.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['objective', 'risk_tolerance'], 'properties': {'disease': {'type': 'string', 'description': 'Optional disease area.'}, 'objective': {'type': 'string', 'minLength': 1, 'description': 'The investigation objective to turn into a reusable MCP prompt.'}, 'target_gene': {'type': 'string', 'description': 'Optional HGNC target symbol.'}, 'risk_tolerance': {'enum': ['low', 'medium', 'high'], 'type': 'string', 'default': 'medium'}}, 'additionalProperties': False}
claidex_tool_catalog
Claidex Tool Catalog
Return the complete MCP tool catalog, optionally including full input schemas and filtering native versus agent-backed tools.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['include_schemas', 'source'], 'properties': {'source': {'enum': ['all', 'claidex-agent', 'mcp-native'], 'type': 'string', 'default': 'all'}, 'include_schemas': {'type': 'boolean', 'default': False, 'description': 'Include full JSON Schemas in the catalog.'}}, 'additionalProperties': False}
consult_specialist_model
Consult Specialist Model
Ask a specialist Gateway model for code, database/tool-calling, statistics, literature, preprint, or mechanistic synthesis support. Use for hard subproblems, second opinions, code generation/review, or complex synthesis.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['task_type', 'prompt'], 'properties': {'prompt': {'type': 'string', 'maxLength': 6000, 'minLength': 1, 'description': 'Focused task for the specialist model.'}, 'context': {'type': 'string', 'maxLength': 10000, 'description': 'Relevant context, snippets, or data. Do not include secrets.'}, 'task_type': {'enum': ['code', 'database', 'reasoning', 'statistics', 'research', 'literature', 'synthesis', 'preprint', 'general'], 'type': 'string', 'description': 'Specialist routing target.'}}, 'additionalProperties': False}
fetch
Fetch Claidex Result
Fetch a specific result returned by search. This compatibility tool supports OpenAI and ChatGPT remote MCP retrieval flows.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['id'], 'properties': {'id': {'type': 'string', 'minLength': 1, 'description': 'Result id returned by the search tool.'}}, 'additionalProperties': False}
fetch_research_url
Fetch Research Url
Fetch a public HTTPS research URL, JSON API response, package metadata endpoint, documentation page, or dataset preview. Blocks private/internal hosts and truncates large responses.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['url', 'max_chars'], 'properties': {'url': {'type': 'string', 'format': 'uri', 'description': 'Public HTTPS URL to fetch.'}, 'max_chars': {'type': 'number', 'default': 8000, 'maximum': 20000, 'minimum': 500}}, 'additionalProperties': False}
get_claim_content
Get Claim Content
Retrieve the complete text content of a specific Claidex Claim by its slug. Use this when you need to read the full post-mortem analysis, including hypothesis, failure mechanism, and prevention analysis.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['slug'], 'properties': {'slug': {'type': 'string', 'minLength': 1, 'description': 'The Claidex claim slug, e.g. exicorilant-mcrpc-gr-bypass-fourth-failure'}}, 'additionalProperties': False}
query_chembl
Query Chembl
Look up a drug or compound in ChEMBL. Returns mechanism of action, primary target, ChEMBL ID, max development phase, molecular type, and synonyms.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['drug_name'], 'properties': {'drug_name': {'type': 'string', 'minLength': 1, 'description': 'Drug or compound name'}}, 'additionalProperties': False}
query_clinicaltrials
Query Clinicaltrials
Search ClinicalTrials.gov for clinical trials. Can search by drug name, condition, target, or NCT ID. Returns trial status, phase, sponsor, primary endpoints, and why_stopped if terminated.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'status', 'phase', 'max_results'], 'properties': {'phase': {'enum': ['PHASE1', 'PHASE2', 'PHASE3', 'PHASE4', 'any'], 'type': 'string', 'default': 'any'}, 'query': {'type': 'string', 'minLength': 1, 'description': 'Search term: drug name, condition, NCT ID, or target'}, 'status': {'enum': ['RECRUITING', 'ACTIVE_NOT_RECRUITING', 'TERMINATED', 'WITHDRAWN', 'COMPLETED', 'any'], 'type': 'string', 'default': 'any'}, 'max_results': {'type': 'number', 'default': 5, 'maximum': 10, 'minimum': 1}}, 'additionalProperties': False}
query_failure_graph
Query Failure Graph
Query the Claidex failure graph for a specific gene target. Returns the Mechanism Risk Score (MRS), failure counts by phase and archetype, and all related claim slugs.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['target_gene'], 'properties': {'target_gene': {'type': 'string', 'minLength': 1, 'description': 'HGNC gene symbol, e.g. PIK3CA, KRAS, EGFR'}}, 'additionalProperties': False}
query_openfda
Query Openfda
Query the FDA FAERS database for adverse event signals for a drug. Returns top adverse event terms, serious case count, and death count.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['drug_name', 'max_results'], 'properties': {'drug_name': {'type': 'string', 'minLength': 1, 'description': 'Drug name as it appears in FAERS'}, 'max_results': {'type': 'number', 'default': 10, 'maximum': 20, 'minimum': 1}}, 'additionalProperties': False}
query_opentargets
Query Opentargets
Query Open Targets for target-disease association evidence. Returns genetic evidence score, clinical evidence, known drugs, tractability, and safety liabilities for a gene-disease pair.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['target_gene', 'disease_term'], 'properties': {'target_gene': {'type': 'string', 'minLength': 1, 'description': 'HGNC gene symbol'}, 'disease_term': {'type': 'string', 'minLength': 1, 'description': 'Disease name or EFO term'}}, 'additionalProperties': False}
query_package_registry
Query Package Registry
Look up package metadata from npm or PyPI before recommending code, analysis packages, API clients, or dataset tooling.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['ecosystem', 'package_name'], 'properties': {'ecosystem': {'enum': ['npm', 'pypi'], 'type': 'string', 'description': 'Package registry to query.'}, 'package_name': {'type': 'string', 'maxLength': 120, 'minLength': 1, 'description': 'Package name.'}}, 'additionalProperties': False}
rank_documents_by_embedding
Rank Documents By Embedding
Embed a query and candidate documents, then rank documents by cosine similarity. Use for semantic matching, retrieval checks, clustering triage, and lightweight RAG over user-provided passages.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'documents', 'top_k'], 'properties': {'query': {'type': 'string', 'maxLength': 4000, 'minLength': 1}, 'top_k': {'type': 'number', 'default': 10, 'maximum': 20, 'minimum': 1}, 'documents': {'type': 'array', 'items': {'type': 'string', 'maxLength': 8000, 'minLength': 1}, 'maxItems': 30, 'minItems': 1}}, 'additionalProperties': False}
rerank_documents
Rerank Documents
Rerank candidate documents/passages against a query using a dedicated reranking model. Use after retrieval/search when exact relevance ordering matters.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'documents', 'top_n'], 'properties': {'query': {'type': 'string', 'maxLength': 4000, 'minLength': 1}, 'top_n': {'type': 'number', 'default': 10, 'maximum': 20, 'minimum': 1}, 'documents': {'type': 'array', 'items': {'type': 'string', 'maxLength': 8000, 'minLength': 1}, 'maxItems': 50, 'minItems': 1}}, 'additionalProperties': False}
run_computation
Run Computation
Evaluate deterministic mathematical expressions with optional variables. Use for algebra, matrices, vectors, transformations, descriptive numerical checks, and reproducible calculations. Does not execute arbitrary JavaScript or install packages.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['expression', 'variables'], 'properties': {'variables': {'type': 'object', 'default': {}, 'description': 'Variables available to the expression. Values must be numbers, strings, vectors, or matrices.', 'propertyNames': {'type': 'string'}, 'additionalProperties': {'anyOf': [{'type': 'number'}, {'type': 'string'}, {'type': 'array', 'items': {'type': 'number'}}, {'type': 'array', 'items': {'type': 'array', 'items': {'type': 'number'}}}]}}, 'expression': {'type': 'string', 'maxLength': 4000, 'minLength': 1, 'description': 'MathJS expression, e.g. mean(values), std(values), multiply(A, b), inv(A).'}}, 'additionalProperties': False}
run_statistical_analysis
Run Statistical Analysis
Run a statistical analysis computation. Supports: Wilson confidence intervals, binomial proportions, phase transition success rates, power calculations, Bayesian posterior estimates, descriptive statistics, and two-proportion comparisons. Returns computed values, interpretation, and LaTeX formula.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['analysis_type', 'inputs'], 'properties': {'inputs': {'type': 'object', 'description': 'Named input parameters. wilson_ci: {successes, n, confidence}. phase_transition_rate: {phase, indication, n_succeeded, n_total}. power_calculation: {n, effect_size, alpha}. bayesian_posterior: {prior_success_rate, n_observed, n_success, prior_strength?}. descriptive_stats: {values: number[]}. failure_rate_comparison: {a_success, a_n, b_success, b_n}.', 'propertyNames': {'type': 'string'}, 'additionalProperties': {'anyOf': [{'type': 'number'}, {'type': 'string'}, {'type': 'array', 'items': {'type': 'number'}}]}}, 'context': {'type': 'string', 'description': 'Optional context about what this analysis is for'}, 'analysis_type': {'enum': ['wilson_ci', 'phase_transition_rate', 'power_calculation', 'bayesian_posterior', 'descriptive_stats', 'failure_rate_comparison'], 'type': 'string'}}, 'additionalProperties': False}
search
Search Claidex
Search Claidex failure claims and preprint flags. This compatibility tool returns citation-ready results for OpenAI and ChatGPT remote MCP flows.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'limit'], 'properties': {'limit': {'type': 'integer', 'default': 8, 'maximum': 10, 'minimum': 1}, 'query': {'type': 'string', 'minLength': 1, 'description': 'Biomedical failure intelligence query.'}}, 'additionalProperties': False}
search_claims
Search Claims
Search the Claidex failure database for post-mortems matching a drug name, gene target, disease, failure archetype, or sponsor. Returns matching claims with title, slug, drug, target, disease, phase, failure archetype, Open Targets score, and MRS score.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'category', 'failure_archetype', 'limit'], 'properties': {'limit': {'type': 'number', 'default': 10, 'maximum': 20, 'minimum': 1}, 'query': {'type': 'string', 'minLength': 1, 'description': 'Search term: drug name, gene symbol, disease, or failure archetype'}, 'category': {'enum': ['Oncology', 'Cardiology', 'Neurology', 'Immunology', 'Infectious Disease', 'Metabolic', 'Rare Disease', 'Other', 'any'], 'type': 'string', 'default': 'any'}, 'failure_archetype': {'enum': ['efficacy_failure', 'safety_signal', 'enrollment_collapse', 'sponsor_decision', 'strategic_reprioritization', 'translational_mismatch', 'biomarker_failure', 'any'], 'type': 'string', 'default': 'any'}}, 'additionalProperties': False}
search_preprint_flags
Search Preprint Flags
Search the Claidex Preprint Watch database for bioRxiv preprints flagged as contradicting the clinical failure record. Search by target gene, disease, or preprint title.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'severity'], 'properties': {'query': {'type': 'string', 'minLength': 1, 'description': 'Search term: gene symbol, disease, or preprint title fragment'}, 'severity': {'enum': ['STRONG', 'MODERATE', 'MILD', 'any'], 'type': 'string', 'default': 'any'}}, 'additionalProperties': False}
search_pubmed
Search Pubmed
Search PubMed for biomedical literature. Returns title, authors, journal, year, DOI, abstract, and PMID for each result.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'max_results'], 'properties': {'query': {'type': 'string', 'minLength': 1, 'description': 'PubMed search query'}, 'max_results': {'type': 'number', 'default': 5, 'maximum': 10, 'minimum': 1}}, 'additionalProperties': False}
web_search
Web Search
Search the web for recent news, investor commentary, analyst notes, press releases, and conference coverage about drugs, clinical trials, or biomedical mechanisms.
Esquema de entrada 
{'type': 'object', '$schema': 'https://json-schema.org/draft/2020-12/schema', 'required': ['query', 'focus'], 'properties': {'focus': {'enum': ['news', 'academic', 'investor', 'any'], 'type': 'string', 'default': 'any'}, 'query': {'type': 'string', 'minLength': 1, 'description': 'Search query'}}, 'additionalProperties': False}
Historial

Cambios recientes en herramientas

Añadido
web_search
25 de September de 2026 a las 02:46
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search_pubmed
25 de September de 2026 a las 02:46
Añadido
search_preprint_flags
25 de September de 2026 a las 02:46
Añadido
search_claims
25 de September de 2026 a las 02:46
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search
25 de September de 2026 a las 02:46
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run_statistical_analysis
25 de September de 2026 a las 02:46
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run_computation
25 de September de 2026 a las 02:46
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rerank_documents
25 de September de 2026 a las 02:46
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rank_documents_by_embedding
25 de September de 2026 a las 02:46
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query_package_registry
25 de September de 2026 a las 02:46
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query_opentargets
25 de September de 2026 a las 02:46
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query_openfda
25 de September de 2026 a las 02:46
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query_failure_graph
25 de September de 2026 a las 02:46
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query_clinicaltrials
25 de September de 2026 a las 02:46
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query_chembl
25 de September de 2026 a las 02:46
Añadido
get_claim_content
25 de September de 2026 a las 02:46
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fetch_research_url
25 de September de 2026 a las 02:46
Añadido
fetch
25 de September de 2026 a las 02:46
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consult_specialist_model
25 de September de 2026 a las 02:46
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claidex_tool_catalog
25 de September de 2026 a las 02:46
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claidex_research_prompt
25 de September de 2026 a las 02:46
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claidex_health_snapshot
25 de September de 2026 a las 02:46
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claidex_claim_risk_matrix
25 de September de 2026 a las 02:46
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claidex_capabilities
25 de September de 2026 a las 02:46
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